Sites:WWW/Tools/INBIO/page - Revision history

Bootsa: Bootsa moved page Sites:Tools-INBIO-page to Sites:WWW/Tools/INBIO/page without leaving a redirect: Reorganise

2024-11-20T10:57:38Z

Bootsa moved page Sites:Tools-INBIO-page to Sites:WWW/Tools/INBIO/page without leaving a redirect: Reorganise

← Older revision	Revision as of 12:57, 20 November 2024
(No difference)

Bootsa: add INBIO website link

2024-09-25T08:13:56Z

add INBIO website link

← Older revision		Revision as of 10:13, 25 September 2024
Line 1:		Line 1:
	The Invasion Biology Ontology (INBIO) developed in the INAS project ([http://www.doi.org/10.5281/zenodo.6826848 Algergawy et al. 2022]) is an ontology for our [https://hi-knowledge.org/invasion-biology/ initial invasion hypothesis network], which summarises the results of the book “Invasion biology: Hypotheses and evidence” ([https://doi.org/10.1079/9781780647647.0000 Jeschke & Heger 2018]). An ontology can be thought of as a machine-readable encyclopaedia, containing the terms and concepts relevant for a specific field, plus their definitions and connections. The aim of INBIO’s first version was to cover those terms and concepts that are relevant in the context of ten major hypotheses in invasion biology included in the small hypothesis network ([https://preprints2020eswc-conferencesorg/posters_demos/paper_279pdf Algergawy et al. 2020]). To create it, we used expert opinion to identify core terms in each of the ten hypotheses. For the Biotic Resistance Hypothesis, as an example, these terms were “''ecosystem''”, “''biodiversity''” and “''species''”. Next, we searched for existing ontologies containing these terms; where this was successful, we used a fusion/merge strategy to integrate respective modules into the INBIO ([https://preprints2020eswc-conferencesorg/posters_demos/paper_279pdf Algergawy et al. 2020]). In further steps, more concepts were added with the aim to provide full conceptual models of the subjects and objects of the ten hypotheses. We plan to expand the INBIO, so that a future version will cover a larger part of the field of invasion biology.		The [https://bioportal.bioontology.org/ontologies/INBIO Invasion Biology Ontology (INBIO)] developed in the INAS project ([http://www.doi.org/10.5281/zenodo.6826848 Algergawy et al. 2022]) is an ontology for our [https://hi-knowledge.org/invasion-biology/ initial invasion hypothesis network], which summarises the results of the book “Invasion biology: Hypotheses and evidence” ([https://doi.org/10.1079/9781780647647.0000 Jeschke & Heger 2018]). An ontology can be thought of as a machine-readable encyclopaedia, containing the terms and concepts relevant for a specific field, plus their definitions and connections. The aim of INBIO’s first version was to cover those terms and concepts that are relevant in the context of ten major hypotheses in invasion biology included in the small hypothesis network ([https://preprints2020eswc-conferencesorg/posters_demos/paper_279pdf Algergawy et al. 2020]). To create it, we used expert opinion to identify core terms in each of the ten hypotheses. For the Biotic Resistance Hypothesis, as an example, these terms were “''ecosystem''”, “''biodiversity''” and “''species''”. Next, we searched for existing ontologies containing these terms; where this was successful, we used a fusion/merge strategy to integrate respective modules into the INBIO ([https://preprints2020eswc-conferencesorg/posters_demos/paper_279pdf Algergawy et al. 2020]). In further steps, more concepts were added with the aim to provide full conceptual models of the subjects and objects of the ten hypotheses. We plan to expand the INBIO, so that a future version will cover a larger part of the field of invasion biology.

JonathanJeschke at 05:06, 18 July 2024

2024-07-18T05:06:45Z

← Older revision		Revision as of 07:06, 18 July 2024
Line 1:		Line 1:
	The Invasion Biology Ontology (INBIO) developed in the INAS project ([http://www.doi.org/10.5281/zenodo.6826848 Algergawy et al. 2022]) is an ontology for our initial invasion hypothesis network, which summarises the results of the book “Invasion biology: Hypotheses and evidence” ([https://doi.org/10.1079/9781780647647.0000 Jeschke & Heger 2018]). An ontology can be thought of as a machine-readable encyclopaedia, containing the terms and concepts relevant for a specific field, plus their definitions and connections. The aim of INBIO’s first version was to cover those terms and concepts that are relevant in the context of ten major hypotheses in invasion biology included in the small hypothesis network ([https://preprints2020eswc-conferencesorg/posters_demos/paper_279pdf Algergawy et al. 2020]). To create it, we used expert opinion to identify core terms in each of the ten hypotheses. For the Biotic Resistance Hypothesis, as an example, these terms were “''ecosystem''”, “''biodiversity''” and “''species''”. Next, we searched for existing ontologies containing these terms; where this was successful, we used a fusion/merge strategy to integrate respective modules into the INBIO ([https://preprints2020eswc-conferencesorg/posters_demos/paper_279pdf Algergawy et al. 2020]). In further steps, more concepts were added with the aim to provide full conceptual models of the subjects and objects of the ten hypotheses. We plan to expand the INBIO, so that a future version will cover a larger part of the field of invasion biology.		The Invasion Biology Ontology (INBIO) developed in the INAS project ([http://www.doi.org/10.5281/zenodo.6826848 Algergawy et al. 2022]) is an ontology for our [https://hi-knowledge.org/invasion-biology/ initial invasion hypothesis network], which summarises the results of the book “Invasion biology: Hypotheses and evidence” ([https://doi.org/10.1079/9781780647647.0000 Jeschke & Heger 2018]). An ontology can be thought of as a machine-readable encyclopaedia, containing the terms and concepts relevant for a specific field, plus their definitions and connections. The aim of INBIO’s first version was to cover those terms and concepts that are relevant in the context of ten major hypotheses in invasion biology included in the small hypothesis network ([https://preprints2020eswc-conferencesorg/posters_demos/paper_279pdf Algergawy et al. 2020]). To create it, we used expert opinion to identify core terms in each of the ten hypotheses. For the Biotic Resistance Hypothesis, as an example, these terms were “''ecosystem''”, “''biodiversity''” and “''species''”. Next, we searched for existing ontologies containing these terms; where this was successful, we used a fusion/merge strategy to integrate respective modules into the INBIO ([https://preprints2020eswc-conferencesorg/posters_demos/paper_279pdf Algergawy et al. 2020]). In further steps, more concepts were added with the aim to provide full conceptual models of the subjects and objects of the ten hypotheses. We plan to expand the INBIO, so that a future version will cover a larger part of the field of invasion biology.

87.77.165.142 at 12:45, 24 June 2024

2024-06-24T12:45:50Z

← Older revision		Revision as of 14:45, 24 June 2024
Line 1:		Line 1:
	The Invasion Biology Ontology (INBIO) developed in the INAS project ([http://www.doi.org/10.5281/zenodo.6826848 Algergawy et al. 2022]) is an ontology for our initial invasion hypothesis network, which summarises the results of the book “Invasion biology: Hypotheses and evidence” ([https://doi.org/10.1079/9781780647647.0000 Jeschke & Heger 2018]). An ontology can be thought of as a machine-readable encyclopaedia, containing the terms and concepts relevant for a specific field, plus their definitions and connections. The aim of INBIO’s first version is to cover those terms and concepts that are relevant in the context of ten major hypotheses in invasion biology included in the small hypothesis network ([https://preprints2020eswc-conferencesorg/posters_demos/paper_279pdf Algergawy et al. 2020]). To create it, we used expert opinion to identify core terms in each of the ten hypotheses. For the Biotic Resistance Hypothesis, as an example, these terms were “''ecosystem''”, “''biodiversity''” and “''species''”. Next, we searched for existing ontologies containing these terms; where this was successful, we used a fusion/merge strategy to integrate respective modules into the INBIO ([https://preprints2020eswc-conferencesorg/posters_demos/paper_279pdf Algergawy et al. 2020]). In further steps, more concepts were added with the aim to provide full conceptual models of the subjects and objects of the ten hypotheses. We plan to expand the INBIO, so that a future version will cover a larger part of the field of invasion biology.		The Invasion Biology Ontology (INBIO) developed in the INAS project ([http://www.doi.org/10.5281/zenodo.6826848 Algergawy et al. 2022]) is an ontology for our initial invasion hypothesis network, which summarises the results of the book “Invasion biology: Hypotheses and evidence” ([https://doi.org/10.1079/9781780647647.0000 Jeschke & Heger 2018]). An ontology can be thought of as a machine-readable encyclopaedia, containing the terms and concepts relevant for a specific field, plus their definitions and connections. The aim of INBIO’s first version was to cover those terms and concepts that are relevant in the context of ten major hypotheses in invasion biology included in the small hypothesis network ([https://preprints2020eswc-conferencesorg/posters_demos/paper_279pdf Algergawy et al. 2020]). To create it, we used expert opinion to identify core terms in each of the ten hypotheses. For the Biotic Resistance Hypothesis, as an example, these terms were “''ecosystem''”, “''biodiversity''” and “''species''”. Next, we searched for existing ontologies containing these terms; where this was successful, we used a fusion/merge strategy to integrate respective modules into the INBIO ([https://preprints2020eswc-conferencesorg/posters_demos/paper_279pdf Algergawy et al. 2020]). In further steps, more concepts were added with the aim to provide full conceptual models of the subjects and objects of the ten hypotheses. We plan to expand the INBIO, so that a future version will cover a larger part of the field of invasion biology.

87.77.165.142 at 12:44, 24 June 2024

2024-06-24T12:44:45Z

← Older revision		Revision as of 14:44, 24 June 2024
Line 1:		Line 1:
	The Invasion Biology Ontology (INBIO) developed in the INAS project ([http://www.doi.org/10.5281/zenodo.6826848 Algergawy et al. 2022]) is an ontology for our initial invasion hypothesis network, which summarises the results of the book “Invasion biology: Hypotheses and evidence” ([https://doi.org/10.1079/9781780647647.0000 Jeschke & Heger 2018]). An ontology can be thought of as a machine-readable encyclopaedia, containing the terms and concepts relevant for a specific field, plus their definitions and connections. The aim of INBIO’s first version ~~was~~ to cover those terms and concepts that are relevant in the context of ten major hypotheses in invasion biology included in the small hypothesis network ([https://preprints2020eswc-conferencesorg/posters_demos/paper_279pdf Algergawy et al. 2020]). To create it, we used expert opinion to identify core terms in each of the ten hypotheses. For the Biotic Resistance Hypothesis, as an example, these terms were “''ecosystem''”, “''biodiversity''” and “''species''”. Next, we searched for existing ontologies containing these terms; where this was successful, we used a fusion/merge strategy to integrate respective modules into the INBIO ([https://preprints2020eswc-conferencesorg/posters_demos/paper_279pdf Algergawy et al. 2020]). In further steps, more concepts were added with the aim to provide full conceptual models of the subjects and objects of the ten hypotheses. We plan to expand the INBIO, so that a future version will cover a larger part of the field of invasion biology.		The Invasion Biology Ontology (INBIO) developed in the INAS project ([http://www.doi.org/10.5281/zenodo.6826848 Algergawy et al. 2022]) is an ontology for our initial invasion hypothesis network, which summarises the results of the book “Invasion biology: Hypotheses and evidence” ([https://doi.org/10.1079/9781780647647.0000 Jeschke & Heger 2018]). An ontology can be thought of as a machine-readable encyclopaedia, containing the terms and concepts relevant for a specific field, plus their definitions and connections. The aim of INBIO’s first version is to cover those terms and concepts that are relevant in the context of ten major hypotheses in invasion biology included in the small hypothesis network ([https://preprints2020eswc-conferencesorg/posters_demos/paper_279pdf Algergawy et al. 2020]). To create it, we used expert opinion to identify core terms in each of the ten hypotheses. For the Biotic Resistance Hypothesis, as an example, these terms were “''ecosystem''”, “''biodiversity''” and “''species''”. Next, we searched for existing ontologies containing these terms; where this was successful, we used a fusion/merge strategy to integrate respective modules into the INBIO ([https://preprints2020eswc-conferencesorg/posters_demos/paper_279pdf Algergawy et al. 2020]). In further steps, more concepts were added with the aim to provide full conceptual models of the subjects and objects of the ten hypotheses. We plan to expand the INBIO, so that a future version will cover a larger part of the field of invasion biology.

87.77.165.142 at 12:44, 24 June 2024

2024-06-24T12:44:01Z

← Older revision		Revision as of 14:44, 24 June 2024
Line 1:		Line 1:
	In the project ~~INAS, we are developing~~ an ontology for ~~the~~ initial hypothesis network, which ~~summarizes~~ the results of the book “Invasion biology: Hypotheses and evidence” ([https://doi.org/10.1079/9781780647647.0000 Jeschke & Heger 2018]). ~~This ontology is called Invasion Biology Ontology (INBIO) ([http://www.doi.org/10.5281/zenodo.6826848 Algergawy et al. 2022]).~~		The Invasion Biology Ontology (INBIO) developed in the INAS project ([http://www.doi.org/10.5281/zenodo.6826848 Algergawy et al. 2022]) is an ontology for our initial invasion hypothesis network, which summarises the results of the book “Invasion biology: Hypotheses and evidence” ([https://doi.org/10.1079/9781780647647.0000 Jeschke & Heger 2018]). An ontology can be thought of as a machine-readable encyclopaedia, containing the terms and concepts relevant for a specific field, plus their definitions and connections. The aim of INBIO’s first version was to cover those terms and concepts that are relevant in the context of ten major hypotheses in invasion biology included in the small hypothesis network ([https://preprints2020eswc-conferencesorg/posters_demos/paper_279pdf Algergawy et al. 2020]). To create it, we used expert opinion to identify core terms in each of the ten hypotheses. For the Biotic Resistance Hypothesis, as an example, these terms were “''ecosystem''”, “''biodiversity''” and “''species''”. Next, we searched for existing ontologies containing these terms; where this was successful, we used a fusion/merge strategy to integrate respective modules into the INBIO ([https://preprints2020eswc-conferencesorg/posters_demos/paper_279pdf Algergawy et al. 2020]). In further steps, more concepts were added with the aim to provide full conceptual models of the subjects and objects of the ten hypotheses. We plan to expand the INBIO, so that a future version will cover a larger part of the field of invasion biology.

	An ontology can be thought of as a machine-readable encyclopaedia, containing the terms and concepts relevant for a specific field, plus their definitions and connections. The aim of INBIO’s first version was to cover those terms and concepts that are relevant in the context of ten major hypotheses in invasion biology included in the small hypothesis network ([https://preprints2020eswc-conferencesorg/posters_demos/paper_279pdf Algergawy et al. 2020]). To create it, we used expert opinion to identify core terms in each of the ten hypotheses. For the Biotic Resistance Hypothesis, as an example, these terms were “''ecosystem''”, “''biodiversity''” and “''species''”. Next, we searched for existing ontologies containing these terms; where this was successful, we used a fusion/merge strategy to integrate respective modules into the INBIO ([https://preprints2020eswc-conferencesorg/posters_demos/paper_279pdf Algergawy et al. 2020]). In further steps, more concepts ~~have been~~ added with the aim to provide full conceptual models of the subjects and objects of the ten hypotheses. We plan to expand the INBIO, so that a future version will cover a larger part of the field of invasion biology.

Bootsa: initial import from Website content document

2024-06-18T21:59:25Z

initial import from Website content document

New page

In the project INAS, we are developing an ontology for the initial hypothesis network, which summarizes the results of the book “Invasion biology: Hypotheses and evidence” ([https://doi.org/10.1079/9781780647647.0000 Jeschke & Heger 2018]). This ontology is called Invasion Biology Ontology (INBIO) ([http://www.doi.org/10.5281/zenodo.6826848 Algergawy et al. 2022]).

An ontology can be thought of as a machine-readable encyclopaedia, containing the terms and concepts relevant for a specific field, plus their definitions and connections. The aim of INBIO’s first version was to cover those terms and concepts that are relevant in the context of ten major hypotheses in invasion biology included in the small hypothesis network ([https://preprints2020eswc-conferencesorg/posters_demos/paper_279pdf Algergawy et al. 2020]). To create it, we used expert opinion to identify core terms in each of the ten hypotheses. For the Biotic Resistance Hypothesis, as an example, these terms were “''ecosystem''”, “''biodiversity''” and “''species''”. Next, we searched for existing ontologies containing these terms; where this was successful, we used a fusion/merge strategy to integrate respective modules into the INBIO ([https://preprints2020eswc-conferencesorg/posters_demos/paper_279pdf Algergawy et al. 2020]). In further steps, more concepts have been added with the aim to provide full conceptual models of the subjects and objects of the ten hypotheses. We plan to expand the INBIO, so that a future version will cover a larger part of the field of invasion biology.